BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019G07SP1|AL427526
(552 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 961 0.0
>3x_Contig1682
Length = 16889
Score = 961 bits (482), Expect = 0.0
Identities = 529/546 (96%), Gaps = 1/546 (0%)
Strand = Plus / Minus
Query: 1 accgcctccggagtaaatcaaacggataarcgagcgtttgtgcgacgccaccgcgtatag 60
||||||||| ||||||||||||||||||| | ||||||||||| || ||||||| |||||
Sbjct: 4014 accgcctcctgagtaaatcaaacggataaactagcgtttgtgctactccaccgcttatag 3955
Query: 61 cgcccatggccagtgtgtataarkgggccaaaggagggtctgtcactggcataartgctt 120
||||||| |||||| ||||||| |||||| |||||||||||||||||||| | |||
Sbjct: 3954 cgcccattgccagtttgtataaatttgccaaattagggtctgtcactggcataaattctt 3895
Query: 121 tcaattgttcatatactgcgaaattcacggcaacgtatggtactactccctaactagtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3894 tcaattgttcatatactgcgaaattcacggcaacgtatggtactactccctaactagtcg 3835
Query: 181 gataaatacccctgtacaaacctctgataccgccttcttccttgaacgtcttcactagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3834 gataaatacccctgtacaaacctctgataccgccttcttccttgaacgtcttcactagaa 3775
Query: 241 gttcccatactccaggtggttttgcaatgtccttggccttcgatttcgaaagtttagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3774 gttcccatactccaggtggttttgcaatgtccttggccttcgatttcgaaagtttagcca 3715
Query: 301 agttcgccgtttgaatcgaaagtctagtccttaccaagtcaagtggatatgtggccaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3714 agttcgccgtttgaatcgaaagtctagtccttaccaagtcaagtggatatgtggccaata 3655
Query: 361 cactcataccaccgcataacgctcctgctgatagtctttgccagttcagcaattgctctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3654 cactcataccaccgcataacgctcctgctgatagtctttgccagttcagcaattgctctt 3595
Query: 421 tccccacggtaccgtcgacatgaaaaatatgcttcttacaccattcgtaaactacaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3594 tccccacggtaccgtcgacatgaaaaatatgcttcttacaccattcgtaaactacaaact 3535
Query: 481 gaaccgcactgtaggggaaaatacggacacaatttaacccattaccacgaaataa-ccag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3534 gaaccgcactgtaggggaaaatacggacacaatttaacccattaccacgaaataatccag 3475
Query: 540 ctacac 545
||||||
Sbjct: 3474 ctacac 3469
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2481
Number of Sequences: 1807
Number of extensions: 2481
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 552
length of database: 10,358,551
effective HSP length: 16
effective length of query: 536
effective length of database: 10,329,639
effective search space: 5536686504
effective search space used: 5536686504
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)